Rotsearch subpackage¶

Module to run the rotation search

get_chunk_size(total, size)[source]¶

get_total_chunk_cycles(total, step)[source]¶

mr_job_succeeded(r_fact, r_free)[source]¶

Check values for job success

rotation_search_factory(method)[source]¶

submit_chunk(chunk_scripts, run_dir, nproc, job_name, submit_qtype, submit_queue, monitor, success_func)[source]¶

Submit jobs in small chunks to avoid using too much disk space

Parameters:	chunk_scripts : list List of scripts for each chunk nproc : int, optional The number of processors to run the job on job_name : str The name of the job to submit submit_qtype : str The cluster submission queue type - currently support SGE and LSF submit_queue : str The queue to submit to on the cluster success_func : func function to check for success