Rotsearch subpackage
Module to run the rotation search
-
get_chunk_size
(total, size)[source]
-
get_total_chunk_cycles
(total, step)[source]
-
mr_job_succeeded
(r_fact, r_free)[source]
Check values for job success
-
rotation_search_factory
(method)[source]
-
submit_chunk
(collector, run_dir, nproc, job_name, submit_qtype, submit_queue, monitor, success_func)[source]
Submit jobs in small chunks to avoid using too much disk space
Parameters: |
- collector (list) –
ScriptCollector containing run scripts
- nproc (int, optional) – The number of processors to run the job on
- job_name (str) – The name of the job to submit
- submit_qtype (str) – The cluster submission queue type - currently support SGE and LSF
- submit_queue (str) – The queue to submit to on the cluster
- success_func (func) – function to check for success
|